STATISTICAL PHYSICS OF BIOLOGICAL SYSTEMS

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Lipid Order

Experimental measurements

Self-assembly of surfactants I

Self-assembly of surfactants II

Self-assembly of surfactants III

Perifpheral protein binding example

Amphiphiles model

Protein Folding

Two state model

Example: Folded structures in a 6x6 lattice

Three state model

Coil-Helix transition

Protein Seggregation

Domain formation I

Domain formation II

Protein Translocation

Curvature induced I

Curvature induced II

Electrophoresis

Ion Channels

Collective effects due to voltage fluctuations

Mesoscopic modeling

Structural properties of a lipid bilayer

Measure the interacting force

Hairpin formation of membrane protein

Instertion of peptide chains into membranes

Protein interaction induced by lipid fluctuations

Molecular motor

Forced thermal ratchets

Fluctuation driven ratchets

Efficiency of forced ratchets

Flocking Report

COOPERATIVE AND CRITICAL PHENOMENA

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Lecture notes

2d-Ising Model

Square Lattice Ising

Eden and Laplacian growth

A General Overview

The Williams Bjerknes model for skin cancer

The DLA model

The Dielectric Breakdown model

DLA and vascular morphogenesis I

DLA and vascular morphogenesis II

Aggregation of flexible chainlike walkers

Shape and plasticity in DLA aggregates

Percolation

Percolation theory

The Forest fire model

The Forest fire model using cellular automata

Surface Growth

Brief Summary

The EW model

The 2d-EW

EW dimensional analysis

Growth with Surface Diffusion

Flocking, Swarming and Herding

Report on collective motion

Phase transition in self-driven particles

Collective and cohesive modtion

Focks of birds