Publications

Marine protected areas maintain pyramid-like structures of coral-reef fish communities

Tabi, Andrea; Gilarranz, Luis J. ; Saavedra, Serguei
Submitted (2022)

Degree-Biased Advection-Diffusion on undirected graphs/networks

Miranda, M.; Estrada, E.
Submitted (2022)

Eigenvalues of random matrices with generalised correlations: a path integral approach

Baron, Joseph William; Jewell, Thomas Jun; Ryder, Christopher; Galla, Tobias
Submitted (2022)

From networked SIS model to the Gompertz function

Ernesto Estrada, Paolo Bartesaghi
Applied Mathematics and Computation , (2022)

Global risk predictions for Pierce’s disease of grapevines

Giménez-Romero, Àlex; Galván, Javier; Montesinos, Marina; Bauzà, Joan; Godefroid, Martin; Fereres, Alberto; Ramasco, José J.; Matı́as, Manuel A.; Moralejo, Eduardo
Submitted (2022)

Integrating theory and experiments to link local mechanisms and ecosystem-level consequences of vegetation patterns in drylands

Martinez-Garcia, Ricardo; Cabal, Ciro; Calabrese, Justin M.; Hernandez-Garcia, Emilio; Lopez, Cristobal; Tarnita, Corina E.; Bonachela, Juan A.
Submitted (2022)

Retarded kernels for longitudinal survival analysis and dynamic prediction

Davies, Annabel L.; Coolen, Anthony C. C.; Galla, Tobias
Submitted (2022)

Spatial effects in parasite induced marine diseases of immobile hosts

Giménez-Romero, Àlex; Vázquez, Federico; López, Cristóbal; Matías, Manuel A.
Submitted (2022)

Structured interactions as a stabilizing mechanism for competitive ecosystems

Calleja-Solanas, Violeta; Khalil, Nagi; Hernández-García, Emilio; Gómez-Gardeñes, Jesús; Meloni, Sandro
Submitted (2022)

Time and space generalized diffusion equation on graph/networks

Estrada, Ernesto; Diaz-Diaz, Fernando
Chaos, Solitons and Fractals 156, 111791 (1-9) (2022)

Modeling the cortical-hippocampal connectivity to resemble in vitro Multi-Electrode recordings.

Bernasconi, Eleonora (Advisors: Claudio Mirasso and Paolo Massobrio)
(2021)

Quantifying the drivers behind collective attention in information ecosystems

Calleja-Solanas, Violeta; Pigani,Emanuele; Palazzi, María J; Solé-Ribalta, Albert; Suweis, Samir; Borge-Holthoefer, Javier; Meloni, Sandro
Journal of Physics: Complexity 2, 45014-45029 (2021)

Traveling pulses in Class-I excitable media

Arinyo-i-Prats, Andreu; Moreno-Spiegelberg, Pablo; Matias, Manuel A.; Gomila, Damià
Physical Review E 104, L052203 (2021)

Study on the role of inhibition on granule cells of the dentate gyrus in the propagation of activity and computation in the hippocampus

Cristian Estarellas Martín (Supervisors: Claudio Mirasso and Santiago Canals)
PhD Thesis (2021)

Evolutionary Game Theory with payoff fluctuations: Bet-Hedging

Calvo Ibáñez, Ruben (supervisor Tobias Galla)
Master Thesis (2021)

Classifying diseases by using biological features to identify potential nosological models

Prieto Santamaría, Lucía; Eduardo P. García del Valle; Massimiliano Zanin; Gandhi Samuel Hernández Chan; Yuliana Pérez Gallardo; Alejandro Rodríguez-González
Scientific Reports 11, 21096 (2021)

Unveiling the role of plasticity rules in reservoir computing

Morales, Guillermo B.; Mirasso, Claudio R.; Soriano, Miguel C.
Neurocomputing 461, 705-715 (2021)

A normal form for excitable vegetation dynamics

Carles Martorell (Advisor: Damià Gomila)
Master Thesis (2021)

Household networks and bubbling: insights from percolation theory

Ellen Brooks-Pollock; Lucas Lacasa; Leon Danon
Philosophical Transactions of the Royal Society B 376: 20200284 (2021) 376, (2021)

Estimates of regional infectivity of COVID-19 in the United Kingdom following imposition of social distancing measures

Robert Challen; Krasimira Tsaneva; Martin Pitt; Tom Edwards; Luke Gompels; Lucas Lacasa; Ellen Brooks-Pollock; Chris Martin; Gareth Griffith; Leon Danon
Phil. Trans. Roy. Soc. B 376: 20200280 (2021) 376, (2021)

A compartmental model for vector transmitted diseases: an application to Xylella fastidiosa

Rosa Flaquer Galmés (Advisor: Matias, Manuel A.)
Master Thesis (2021)

Comprehensive analytical approaches reveal species-specific search strategies in sympatric apex predatory sharks

Hannah J Calich; Jorge P Rodríguez; Víctor M Eguíluz, Neil Hammerschlag; Charitha Pattiaratchi; Carlos M Duarte; Ana MM Sequeira
Ecography 44, 1-13 (2021)

Modelling Parasite-produced Marine Diseases: The case of the Mass Mortality Event of Pinna nobilis

Giménez-Romero, Àlex; Grau, Amalia; Hendriks, Iris E.; Matias, Manuel A.
Ecological Modelling 459, 109705 (1-15) (2021)

The AIMe registry for artificial intelligence in biomedical research

Julian Matschinske, ..., Massimiliano Zanin, Olga Zolotareva, Jan Baumbach & David B. Blumenthal
Nature Methods , (2021)

Reservoir Computing: Theory, Physical Implementations, and Applications

Nakajima, Kohei; Fischer, Ingo (Editors)
, Springer Singapore (2021)

Information Transmission in Delay-Coupled Neuronal Circuits in the Presence of a Relay Population

Sánchez-Claros, Jaime ; Pariz, Aref; Valizadeh, Alireza; Canals, Santiago; Mirasso, Claudio
Frontiers in Systems Neuroscience 15, 705371: 1-16 (2021)

Beyond the adiabatic limit in systems with fast environments: A tau-leaping algorithm

Berrios-Caro, Ernesto; Galla, Tobias
Physical Review E 104, 014122 (2021)

Leveraging network analysis to evaluate biomedical named entity recognition tools

Eduardo P. García del Valle; Gerardo Lagunes García; Lucía Prieto Santamaría; Massimiliano Zanin; Ernestina Menasalvas Ruiz; Alejandro Rodríguez-González
Scientific Reports 11, 13537 (2021)

Beyond pairwise network similarity: exploring mediation and suppression between networks

Lucas Lacasa, Sebastiano Stramaglia, Daniele Marinazzo
Communications Physics 4, (2021)

DisMaNET: A network-based tool to cross map disease vocabularies

Eduardo P.García del Valle; Gerardo Lagunes García; Lucía Prieto Santamaría; Massimiliano Zanin; Ernestina Menasalvas Ruiz; Alejandro Rodríguez-González
Computer Methods and Programs in Biomedicine 207, 106233 (2021)

Statistical and Machine Learning Link Selection Methods for Brain Functional Networks: Review and Comparison

Ilinka Ivanoska; Kire Trivodaliev; Slobodan Kalajdziski; Massimiliano Zanin
Brain Sciences 11 (6), 735 (2021)

Global COVID-19 lockdown highlights humans as both threats and custodians of the environment

Amanda E. Bates et al
Biological Conservation 263, 109175 (2021)

Principles and open questions in functional brain network reconstruction

Korhonen, Onerva; Zanin, Massimiliano; Papo, David
Human Brain Mapping , (2021)

Transmission delays and frequency detuning can regulate information flow between brain regions

Pariz, A., Fischer, I., Valizadeh, A. Mirasso, C.
Plos Computational Biology 17, e1008129 (2021)

A Fast Transform for Brain Connectivity Difference Evaluation

Zanin, Massimiliano; Ivanoska, Ilinka; Güntekin, Bahar; Yener, Görsev; Loncar-Turukalo, Tatjana; Jakovljevic, Niksa; Sveljo, Olivera; Papo, David
Neuroinformatics , (2021)

Host‐association as major driver of microbiome structure and composition in Red Sea seagrass ecosystems

N Garcias‐Bonet; VM Eguíluz; R Díaz‐Rúa; CM Duarte
Environmental Microbiology 23, 2021-2034 (2021)

An ecological approach to structural flexibility in online communication systems

Palazzi,María J.; Solé-Ribalta,Albert; Calleja-Solanas,Violeta; Meloni,Sandro; Plata,Carlos A.; Suweis,Samir; Borge-Holthoefer,Javier;
Nature Communications , (2021)

A standardisation framework for bio‐logging data to advance ecological research and conservation

Ana MM Sequeira, Malcolm O'Toole, Theresa R Keates, Laura H McDonnell, Camrin D Braun, Xavier Hoenner, Fabrice RA Jaine, Ian D Jonsen, Peggy Newman, Jonathan Pye, Steven J Bograd, Graeme C Hays, Elliott L Hazen, Melinda Holland, Vardis M Tsontos, Clint Blight, Francesca Cagnacci, Sarah C Davidson, H
Methods in Ecology and Evolution 12, 996-1007 (2021)

DRUG RESISTANCE IN INFECTIOUS DISEASES (CSIC Libro Blanco)

Riva, Luis; Galla, Tobias; et al.
Libro Blanco Desafíos Científicos CSIC 2030, , (2021)

Switching environments, synchronous sex, and the evolution of mating types

Berríos-Caro, Ernesto; Galla, Tobias; Constable, George W. A.
Theoretical Population Biology 138, 28-42 (2021)

nMNSD—A Spiking Neuron-Based Classifier That Combines Weight-Adjustment and Delay-Shift

Susi, G.; Antón-Toro, L. F.; Maestú, F.; Pereda, E.; Mirasso, C.
Frontiers in Neuroscience 15, Article 582608 (2021)

Landscape-induced spatial oscillations in population dynamics

Dornelas, Vivian; Colombo, Eduardo H.; López, Cristóbal; Hernández-García, Emilio; Anteneodo, Celia
Scientific Reports 11, 3470 (1-11) (2021)

Neutral Theory for competing attention in social networks

Plata,Carlos A.;Pigani,Emanuele;Azaele,Sandro;Calleja-Solanas,Violeta;Palazzi,María J.;Solé-Ribalta,Albert;Borge-Holthoefer,Javier;Meloni,Sandro;Suweis,Samir;
Physical Review Research 3, 013070 (2021)

Competition delays multi-drug resistance evolution during combination therapy

Berrios-Caro, Ernesto; Gifford, Danna R; Galla, Tobias
Journal of Theoretical Biology 509, 110524 (1-15) (2021)

Editorial on the Research Topic Fundamentals and Applications of AI: An Interdisciplinary Perspective

Eguiluz, V.; Mirasso, C. R.; Vicente, R.
Frontiers in Physics Interdisciplinary Physics 19, (2021)

Informational cost and networks navigability

Estrada, Ernesto
Applied Mathematics and Computation 397, 125914 (2021)

Modeling brain reorganization after hemispherectomy

Seoane, L.; Solé, R.
Submitted (2021)

Species exclusion and coexistence in a noisy voter model with a competition-colonization tradeoff

Martínez-García, Ricardo; López, Cristóbal; Vazquez, Federico
Physical Review E 103, 032406 (2021)

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