2. Publicacions

Publicacions

A Complex Network Approach to Phylogenetic Trees: From Genes to the Tree of Life

Herrada, E.A. (Directors: Emilio Hernández-García, Víctor M. Eguíluz and Carlos M. Duarte.)
PhD Thesis (2011)

How reliable are Finite-Size Lyapunov Exponents for the assessment of ocean dynamics?

Hernandez-Carrasco, Ismael; López, Cristóbal; Hernández-García, Emilio; Turiel, Antonio
Ocean Modelling 36, 208-218 (2011)

Diffusing opinions in bounded confidence processes

M. Pineda , R. Toral, and E. Hernandez-Garcia.
European Physical Journal D 62, 109-117 (2011)

Spatial clustering of interacting bugs: Levy flights versus Gaussian jumps

Heinsalu, Els; Hernandez-Garcia, Emilio; Lopez, Cristobal
EPL (Europhysics Letters) 92, 40011 (1-6) (2010)

Biological Impact of Ocean Transport: A Finite-Size Lyapunov Characterization

Hernandez-Garcia, E.; Bettencourt, J.H.; Garcon, V.; Hernandez-Carrasco, I.; Lopez, C.; Rossi, V.; Sudre, J.; Tew Kai, E.
Proceedings of the 3rd Conference on Nonlinear Science and Complexity, Ankara, July 2010 (Ed. by D. Baleanu, Z.B. Guvenc and O. Defterli), http://nsc10.cankaya.edu.tr/proceedings/index.html, , Article Number 54 (2010)

Nonlinear Dynamics and Regime Shifts in Ecosystems

S. Bacelar, Flora (Director: Emílio Hernández-García)
PhD Thesis (2010)

Preface "Nonlinear processes in oceanic and atmospheric flows"

Mancho, A.M.; Wiggins, S.; Turiel, A.; Hernandez-Garcia, E.; Lopez, C.; Garcia-Ladona, E.
Nonlinear Processes in Geophysics 17, 283-285 (2010)

How Gaussian competition leads to lumpy or uniform species distributions

Pigolotti, Simone; López, Cristóbal; Hernández-García, Emilio; Andersen, Ken H.
Theoretical Ecology 3, 89-96 (2010)

Simple models for scaling in phylogenetic trees

Hernandez-Garcia, Emilio; Tugrul, Murat; Herrada, E. Alejandro; Eguíluz, V.M.; Klemm, Konstantin
International Journal of Bifurcation and Chaos 20, 805-811 (2010)

Modeling approach to regime shifts of primary production in shallow coastal ecosystems

Zaldívar, J.M.;Bacelar, F.S.; Dueri, S.; Marinov, D.; Viaroli, P.; Hernández-García, E.
Ecological Modelling 220, 3100-3110 (2009)

Diversity-induced resonance in a system of globally coupled linear oscillators

Toral, Raul; Hernandez-Garcia, Emilio;Gunton, James D.
International Journal of Bifurcation and Chaos 19, 3499-3508 (2009)

Chemical and Biological Processes in Fluid Flows: A Dynamical Systems Approach

Neufeld, Zoltan; Hernandez-Garcia, Emilio
, Imperial College Press, London (2009)

Scaling properties and robustness of finite-size Lyapunov exponents in surface marine flows

Hernández-Carrasco, Ismael (Directors: López, Cristóbal; Hernández-García, Emilio)
Master Thesis , (2009)

Simple Branching Models for Macroevolution

Tugrul, Murat (Directors: Emilio Hernandez-Garcia and Victor M. Eguiluz)
Master Thesis (2009)

Surface mixing and biological activity in the four Eastern Boundary Upwelling Systems

Rossi, Vincent; López, Cristóbal; Hernández-García, Emilio; Sudre, Joel; Garcon, Veronique; Morel, Yves
Nonlinear Processes in Geophysics 16, 557-568 (2009)

Noisy continuous-opinion dynamics

M. Pineda, R. Toral and E. Hernandez-Garcia
Journal of Statistical Mechanics: Theory and Experiment P08001, (1-18) (2009)

Top marine predators track Lagrangian coherent structures

Tew Kai, E.; Rossi, V.; Sudre, J.; Weimerskirch, H.; Lopez, C.; Hernandez-Garcia, E.; Marsac, F.; Garçon, V.
Proceedings of the National Academy of Sciences of the USA (PNAS) 106, 8245-8250 (2009)

Species competition: coexistence, exclusion and clustering

Hernández-García, Emilio; López, Cristóbal; Pigolotti, Simone; Andersen, Ken H.
Philosophical Transactions of the Royal Society A 367, 3183-3195 (2009)

Ecological Thresholds and Regime Shifts: from theory to operation

Andersen, Tom; Carstensen, Jacob; Hernandez-Garcia, Emilio; Duarte, Carlos
Trends in Ecology and Evolution 24, 49-57 (2009)

Joint effects of nutrients and contaminants on the dynamics of a food chain in marine ecosystems

S. Bacelar, Flora; Dueri, Sibylle; Hernández-García, Emilio; Zaldívar, José Manuel
Mathematical Biosciences 218, 24-32 (2009)

Comparison between Eulerian diagnostics and Finite-Size Lyapunov Exponents computed from Altimetry in the Algerian basin

d'Ovidio, F; Isern-Fontanet, J;López, C; Hernández-García, E; García-Ladona, E
Deep-Sea Research I 56, 15-31 (2009)

Network analysis identifies weak and strong links in a metapopulation system

Rozenfeld, A.F.; Arnaud-Haond, S.; Hernández-García, E.; Eguíluz, V.M; Serrão, E.A.; Duarte, C.M.
Proceedings of the National Academy of Sciences of the USA (PNAS) 105, 18824-18829 (2008)

Universal functions and exactly solvable chaotic systems

García-Nustes, M.A.; Hernández-García, E.; González, J.A.
Sao Paulo Journal of Mathematical Sciences 2, 203-221 (2008)

Bifurcation Analysis of a Marine Food Chain

Souza Bacelar, Flora (Director E. Hernandez-Garcia)
Master Thesis (2008)

Universal Scaling in the Branching of the Tree of Life

Herrada, E.A.; Tessone, C.J.; Klemm, K.; Eguíluz, V.M.; Hernández-García, E.; Duarte, C.M.
PLoS ONE 3, e2757 (1-6) (2008)

Biological activity in the wake of an island close to a coastal upwelling

Sandulescu, M.; López, C.; Hernández-García, E.; Feudel, U.
Ecological Complexity 5, 228-237 (2008)

Comparative study of mixing and biological activity of the Benguela and Canary upwelling systems

Rossi, V.; López,C.; Sudre, J.; Hernández-García,E.; Garçon, V.
Geophysical Research Letters 35, L11602 (1-5) (2008)

Lagrangian transport through an ocean front in the North-Western Mediterranean Sea

Mancho, A.M.; Hernandez-Garcia, E.; Small, D.; Wiggins, S.; Fernandez, V.
Journal of Physical Oceanography 38, 1222-1237 (2008)

Crystallization and melting of bacteria colonies and Brownian bugs

Ramos, F.; López, C.; Hernández-García, E.; Muñoz, M.A.
Physical Review E 77, 021102(1-12) (2008)

Stretching fields and lines in the transport dynamics of the Western Mediterranean

Hernandez-Garcia, E; d'Ovidio, F.; Fernandez, V.; Garcia-Ladona, E.; Isern-Fontanet, J.; Lopez, C.; Mancho, A.M.; Small, D.; Wiggins, S.
PAMM, Proceedings in Applied Mathematics and Mechanics, , 7, 1101307-1101308 (2007)

Plankton blooms in vortices: The role of biological and hydrodynamic time scales

Sandulescu,M; López, C; Hernández-García, E; Feudel,U
Nonlinear Processes in Geophysics 14, 443-454 (2007)

Spatial patterns in non-locally interacting particle systems

Lopez, C.; Hernandez-Garcia, E.
European Physical Journal-Special Topics 146, 37-45 (2007)

Species clustering in competitive Lotka-Volterra models

Pigolotti, S.; López, C.; Hernández-García, E.
Physical Review Letters 98, 258101(1-4) (2007)

Evolutionary and Ecological Trees and Networks

Hernandez-Garcia, E.; Herrada, E. A.;Rozenfeld, A.F.; Tessone, C.J.; Eguiluz, V.M.; Duarte, C.M.; Arnaud-Haond, S.; Serrao, E.
Nonequilibrium Statistical Mechanics And Nonlinear Physics: XV Conference on Nonequilibrium Statistical Mechanics and Nonlinear Physics (Edited by O. Descalzi, O.A. Rosso and H.A. Larrondo), American Institute of Physics, 78-83 (2007)

Spectrum of genetic diversity and networks of clonal organisms

Rozenfeld, A.F.; Arnaud-Haond, S.; Hernandez-Garcia, E.; Eguiluz, V.M.; Matias, M.A.; Serrao, E. ; Duarte, C.M.
Journal of the Royal Society Interface 4, 1093-1102 (2007)

An absorbing phase transition from a structured active particle phase

Lopez, C.; Ramos, F.; Hernandez-Garcia, E.
Journal of Physics: Condensed Matter 19, 065133 (1-8) (2007)

Clone size distributions in networks of genetic similarity

Hernandez-Garcia, E.; Rozenfeld, A.F.; Eguiluz, V.M.; Arnaud-Haond, S.; Duarte, C.M.
Physica D 214, 166-173 (2006)

Kinematic studies of transport across an island wake, with application to the Canary islands

Sandulescu, M; Hernández-García, E; López, C; Feudel, U
Tellus A 58, 605-615 (2006)

Logistic population growth and beyond: the influence of advection and nonlocal effects

Hernandez-Garcia, Emilio; Lopez, Cristobal
The Logistic Map and the Route to Chaos, edited by M. Ausloos and M. Dirickx, Springer-Verlag, 117-129 (2006)

Birth, death and diffusion of interacting particles

Hernández-García, Emilio; López, Cristóbal
Journal of Physics: Condensed Matter 17, S4263-S4274 (2005)

Leaking method approach to surface transport in the Mediterranean Sea from a numerical ocean model

Schneider, J.; Fernandez, V.; Hernandez-Garcia, E.
Journal of Marine Systems 57, 111-126 (2005)

Numerical studies of an interacting particle system and its deterministic description

Hernandez-Garcia, Emilio;López, Cristóbal
Physica A 356, 95-99 (2005)

Mixing structures in the Mediterranean Sea from Finite-Size Lyapunov Exponents

d'Ovidio, F; Fernandez, V; Hernandez-Garcia, E; Lopez, C
Geophysical Research Letters 31, L17203 (2004)

Sustained plankton blooms under open chaotic flows

Hernandez-Garcia, Emilio; Lopez, Cristobal
Ecological Complexity 1, 253-259 (2004)

Clustering, advection and patterns in a model of population dynamics

Hernandez-Garcia, Emilio; Lopez, Cristobal
Physical Review E 70, 016216 (1-11) (2004)

Bichos que se reproducen y amontonan, y su descripción macroscópica

Hernandez-Garcia, Emilio; Lopez, Cristobal
Revista Española de Física 18, 49-52 (2004)

Boundary-forced spatial chaos

Eguiluz, Victor M.; Hernandez-Garcia, Emilio; Piro, Oreste
Instabilities and Nonequilibrium Structures VII & VIII, edited by Orazio Descalzi, Javier Martínez, and Enrique Tirapegui, Kluwer Academic Publishers, Dordrecht, 205-212 (2004)

On some localized solutions of coupled Ginzburg-Landau equations

Montagne,R.; Hernandez-Garcia, E.
Instabilities and Nonequilibrium Structures VII & VIII, edited by Orazio Descalzi, Javier Martínez, and Enrique Tirapegui, Kluwer academic publishers, Dordrecht, 273-279 (2004)

On the topographic rectification of ocean fluctuations

Alvarez, Alberto; Hernandez-Garcia, Emilio; Tintore, Joaquin
Instabilities and Nonequilibrium Structures VII & VIII, edited by Orazio Descalzi, Javier Martínez, and Enrique Tirapegui, Kluwer academic publishers, Dordrecht, 133-139 (2004)

Fluctuations impact on a pattern-forming model of population dynamics with non-local interactions

Lopez, Cristobal; Hernandez-Garcia, E
Physica D 199, 223-234 (2004)

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