2. Publications

Publications

Echo chamber effects in signed networks

Vendeville, Antoine; Diaz-Diaz, Fernando
Submitted (2025)

Excitable dynamics and coral reef formation: A simple model of macro-scale structure development

Álvarez-Alegría, Miguel; Moreno-Spiegelberg, Pablo; Matias, Manuel A; Gomila, Damià
Submitted (2025)

Global Balance and Systemic Risk in Financial Correlation Networks

Bartesaghi, Paolo; Diaz-Diaz, Fernando; Grassi, Rosanna; Uberti, Pierpaolo
Submitted (2025)

Unravelling the universal spatial properties of coral reefs

Giménez-Romero, Àlex; Matías, Manuel A.; Duarte, Carlos M.
Global Ecology and Biogeography 34, e13939 (1-12) (2025)

A cross-disciplinary research framework at institution level and beyond

Argyris, Apostolos; Hernández-García, Emilio; San Miguel, Maxi
Nature Communications 15, 10399 (1-3) (2024)

Identifying Ordinal Similarities at Different Temporal Scales

Zunino, Luciano; Porte, Xavier; Soriano, Miguel C.
Entropy 26, 1016 (2024)

Entropy and type-token ratio in gigaword corpora

Rosillo-Rodes,Pablo;San Miguel,Maxi;Sanchez,David;
Submitted (2024)

Role of coherence in many-body Quantum Reservoir Computing

Palacios, A; Martínez-Peña, R.; Soriano, M. C.; Giorgi, G. L.; Zambrini, R.
Communications Physics 7, 369 (2024)

On the structure of species-function participation in multilayer ecological networks

Hervías-Parejo, Sandra; Cuevas-Blanco, Mar; Lacasa, Lucas; Traveset, Anna; Donoso, Isabel; Heleno, Rubén; Nogales, Manuel; Rodríguez-Echeverría, Susana; Melián, Carlos; Eguíluz, Victor
Nature Communications 15, (2024)

Linking intercontinental biogeographic events to decipher how European vineyards escaped Pierce's disease

Moralejo, Eduardo; Giménez-Romero, Àlex; Matías, Manuel A.
Proceedings of the Royal Society B 291, 20241130 (1-12) (2024)

Exploring language relations through syntactic distances and geographic proximity

De Gregorio, Juan; Toral, Raúl; Sánchez, David
EPJ Data Science 13, 61 (1-27) (2024)

Generating functional analysis of a thresholded random generalised Lotka-Volterra model

Roig Oliver, Adrian (supervisor: Galla, Tobias)
Master Thesis (2024)

Competition between group interactions and nonlinearity in voter dynamics on hypergraphs

Kim,Jihye; Lee, Deok-Sun; Min, Byungjoon; Porter, Mason A. ; San Miguel, Maxi; Goh,K.-I.
Submitted (2024)

Shear and transport in a flow environment determine spatial patterns and population dynamics in a model of nonlocal ecological competition

Silvano, Nathan O. ; Valeriano, João; Hernández-García, Emilio; López, Cristóbal; Martinez-Garcia, Ricardo
Submitted (2024)

Probing coherent quantum thermodynamics using a trapped ion

Onishchenko, O.; Guarnieri, G.; Rosillo-Rodes, P.; Pijn, D.; Hilder, J.; Poschinger, U.G.; Perarnau-Llobet, M.; Eisert, J.; Schmidt-Kaler, F.
Nature Communications 15, (2024)

Nonequilibrium Transition between Dissipative Time Crystals

Cabot, Albert; Giorgi, Gian Luca; Zambrini, Roberta
PRX Quantum 5 , 030325 (1-22) (2024)

Retrieving past quantum features with deep hybrid classical-quantum reservoir computing

Nokkala, Johannes; Giorgi, Gian Luca; Zambrini, Roberta
Machine Learning: Science and Technology 5, 035022 (1-14) (2024)

Understanding the role of top-down input in visual information processing

Sofía Gil Rodrigo (Supervisors: Javier Galván and Claudio Mirasso)
Master Thesis (2024)

Simple physics-based adjustments reconcile the results of Eulerian and Lagrangian techniques for moisture tracking

Crespo-Otero, A.; Insua-Costa, D.; Hernández-García, E.; López, C.; Míguez-Macho, G.
Earth System Dynamics Discussions, in consideration for Earth System Dynamics 2024, (2024)

Experimental multi-bit header classification at 28.5 Gb/s with step-index few-mode fibers

Pflüger, Moritz; Ortín, Silvia; Leininger, Lars; Mirasso, Claudio R.; Argyris, Apostolos
Journal of Lightwave Technology 42 (22), 7962 - 7968 (2024)

How Diet and Lifestyle Can Fine-Tune Gut Microbiomes for Healthy Aging

Tamayo, M.; M. Olivares, M.; Ruas-Madiedo, P.; Margolles, A.; Espín, J. C.; Medina, I.; Moreno-Arribas, M. V.; Canals, S.. ; Mirasso, C. R.; Ortín, S.; Beltrán-Sánchez, H.; Palloni, A.; Tomás-Barberán, F.; Sanz, Y.
Annual Review of Food Science and Technology 15, 283–305 (2024)

A photonics perspective on computing with physical substrates

Abreu; Boikov; Goldmann, M.; Jonuzi; Lupo; Masaad; Nguyen; Picco; Pourcel; Skalli; Talandier, L.; Vettelschoss; Vlieg; Argyris, A.; Bienstman; Brunner; Dambre; Daudet; Domenech; Fischer, I.; Horst; Massar; Mirasso, C.R.; Offrein; Rossi; Soriano, M. C.; Sygletos; Turitsyn
Reviews in Physics 12, 100093 (2024)

A generalized vector-field framework for mobility

Liu, Erjian; Mazzoli, Mattia; Yan, Xiao-Yong; Ramasco, Jose J.
Communications Physics 7, 190 (2024)

High-order correlations reveal complex memory in temporal hypergraphs

Gallo, Luca; Lacasa, Lucas; Latora, Vito; Battiston, Federico
Nature Communications 15, (2024)

NEURAL DYNAMICS AND INFORMATION TRANSMISSION: from cortical circuits to the hippocampal modelling

Jaime Sánchez Claros
PhD Thesis (2024)

Dynamical stability and chaos in artificial neural network trajectories along training

Danovski, Kaloyan; Soriano, Miguel C.; Lacasa, Lucas
Frontiers in Complex Systems 2, 1367957 (2024)

Thermodynamics of computations with absolute irreversibility, unidirectional transitions, and stochastic computation times

Manzano, Gonzalo; Kardeş, Gülce; Roldán, Édgar; Wolpert, David
Physical Review X , 021026 (2024)

Computational lexical analysis of Flamenco genres

Rosillo-Rodes, Pablo; San Miguel, Maxi; Sánchez, David
Submitted (2024)

Global warming significantly increases the risk of Pierce's disease epidemics in European vineyards

Giménez-Romero, Àlex; Iturbide, Maialen; Moralejo, Eduardo; Gutiérrez, José M.; Matías, Manuel A.
Scientific Reports 14, 9648 (1-12) (2024)

Mapping the distribution of seagrass meadows from space with deep convolutional neural networks

Giménez-Romero, Àlex; Ferchichi, Dhafer; Moreno-Spiegelberg, Pablo; Sintes, Tomàs; Matías, Manuel A.
Submitted (2024)

Time delay reservoir computing with a silicon microring resonator and a fiber-based optical feedback loop

Donati, Giovanni; Argyris, Apostolos; Mancinelli, Mattia; Mirasso, Claudio R.; Pavesi, Lorenzo
Optics Express 32 (8), 13419-13437 (2024)

Pulsed interactions unify reaction-diffusion and spatial nonlocal models for biological pattern formation

Eduardo H. Colombo, Ricardo Martinez-Garcia, Justin M. Calabrese, Cristobal Lopez, Emilio Hernandez-Garcia
Journal of Statistical Mechanics: Theory and Experiment 2024, 034001 (2024)

Patterns in temporal networks with higher-order egocentric structures

Arregui-García, Beatriz; Longa, Antonio; Lotito, Quintino Francesco; Meloni, Sandro; Cencetti, Giulia;
Entropy 26(3), 256 (2024)

High-resolution climate data reveals increased risk of Pierce's Disease for grapevines worldwide

Giménez-Romero, Àlex; Moralejo, Eduardo; Matías, Manuel A.
Submitted (2024)

Signed graphs in data sciences via communicability geometry

Diaz-Diaz, Fernando; Estrada, Ernesto
Submitted (2024)

Quantum memories for squeezed and coherent superpositions in a driven-dissipative nonlinear oscillator

Labay-Mora, Adrià; Zambrini, Roberta; Giorgi, Gian Luca
Physical Review A 109, 032407 (1-15) (2024)

Modeling circuit mechanisms of opposing cortical responses to visual flow perturbations

Galván Fraile, J; Scherr, F; Ramasco, J. J.; Arkhipov, A.; Maass, W; Mirasso, C. R.
Plos Computational Biology 20, e1011921 (2024)

Critical mobility in policy making for epidemic containment

Moreno López, Jesús A; Mateo, David; Hernando, Alberto; Meloni, Sandro; Ramasco, Jose J;
Submitted (2024)

Entropy Estimators for Markovian Sequences: A Comparative Analysis

De Gregorio, J.; Sánchez, D.; Toral, R.
Entropy 26, 79 (1-26) (2024)

Ordering dynamics and aging in the Symmetrical Threshold model

Abella, David; González-Avella, Juan Carlos; San Miguel, Maxi; Ramasco, José J.
New Journal of Physics 26, 013033 (2024)

A model for seagrass species competition: dynamics of the symmetric case

Moreno-Spiegelberg, Pablo; Gomila, Damià
Mathematical Modeling of Natural Phenomena 19, 2 (1-18) (2024)

A comprehensive dataset on global coral reefs size and geometry

Giménez-Romero, Alex; Matias, Manuel A.; Duarte, Carlos M.
Submitted (2024)

Food Webs as Multilayer Networks

Melián, Carlos J.; Eguíluz, Victor M.
Encyclopedia of Biodiversity (Third Edition), vol. 5. Edited by Samuel M. Scheiner, Elsevier, 84-91 (2024)

Leaf susceptibility of Macaronesian laurel forest species to Phytophthora ramorum

Moralejo, Eduardo; García-Muñoz, José A.; Denman, Sandra; Giménez-Romero, Àlex
Submitted (2024)

Quantifying the diversity of multiple time series with an ordinal symbolic approach

Zunino, Luciano; Soriano, Miguel C.
Physical Review E 108, 065302 (2023)

What Is in a Simplicial Complex? A Metaplex-Based Approach to Its Structure and Dynamics

Manuel Miranda, Gissell Estrada-Rodríguez and Ernesto Estrada
Entropy 12, 1599 (2023)

Modeling language ideologies for the dynamics of languages in contact

Rosillo-Rodes, Pablo; San Miguel, Maxi; Sanchez, David
Chaos 11, 113117 (1-16) (2023)

Network percolation provides early warnings of abrupt changes in coupled oscillatory systems: An explanatory analysis

Ehstand,Noémie; Donner,Reik V.; López,Cristóbal; Hernández-García, Emilio
Physical Review E 108, 054207 (2023)

A compartmental model for Xylella fastidiosa diseases with explicit vector seasonal dynamics

Giménez-Romero, Àlex; Moralejo, Eduardo; Matias, Manuel A.
Phytopathology 113, 1686-1696 (2023)

Age of infection disease modeling: from Kermack and McKendrick to multi-compartment models

Bousakla El Boujdaini, Mustapha (supervisors: Matias, Manuel A.; Giménez-Romero, Alex)
Master Thesis (2023)

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